°  Moving objects around Shift Grab next object for movement/rotation (YASARA Model and above) Ctrl+Shift Grab previous object for movement/rotation (YASARA Model and above) LeftClick in the 'Name' column of the HUD Grab the selected object for movement/rotation (YASARA Model and above) LeftButton+MouseMovement Rotate object or scene or move label Ctrl+LeftButton+MouseMovement Rotate object or scene, centered on the marked atom LeftButton+RightButton+MouseMovement Move object or scene along the X/Y-axes MiddleButton+MouseMovement Move object or scene along the X/Y-axes Cursor keys Move object or scene along the X/Y-axes RightButton+MouseMovement Move object, scene or label along the Z-axis 1..9 Set speed of movements (not on numeric keypad) Q,W,E,R,T,Y Move grabbed object or scene along the three axes (English keyboard) Ctrl+1..9 Set speed of rotations (not on numeric keypad) A,S,D,F,G,H Rotate grabbed object or scene about the three axes (English keyboard) Z,X,C,V,B,N Start automatic rotation of grabbed object or scene about the three axes (English keyboard) LeftClick on a label Mark label and move it around If an object reacts strangely when moving it around , the reason is most likely that some atoms are incorrectly placed far away from the object's center, for example after reading atom coordinates from a corrupted file. This makes the object appear larger, requiring YASARA to slow down or block movements. Delete these atoms or use the keyboard instead of the mouse. The help movie 'Working with YASARA' shows how to configure the MacBook TouchPad and the Apple MightyMouse to function optimally with YASARA. When configured as suggested, the following bindings are available: Apple MacBook TouchPad : Button+SingleFingerMovement Rotate object or scene or move label Ctrl+Button+SingleFingerMovement Rotate object or scene, centered on the marked atom DoubleFingerMovement Move object or scene along the X/Y-axes Button+DoubleFingerMovement Move object, scene or label along the Z-axis Apple MightyMouse: LeftButton+MouseMovement Rotate object or scene or move label Ctrl+LeftButton+MouseMovement Rotate object or scene, centered on the marked atom SideButtons+MouseMovement Move object or scene along the X/Y-axes ScrollBall Move object or scene along the X/Y-axes RightButton+MouseMovement Move object, scene or label along the Z-axis °  Changing the scene style F1 Set scene style to balls F2 Set scene style to balls&sticks F3 Set scene style to sticks F4 Set scene style to Calpha trace F5 Set scene style to tube F6 Set scene style to ribbon F7 Set scene style to cartoon F8 Change side-chain style LeftClick in the VISibility column of the HUD Switch selected object on/off RightClick in the same VISibility column Switch selected object on and all others off °  Editing Delete Delete the marked atom or label Alt+LeftClick on an atom Repeat the last command. KDE by default blocks this combination, use Tab instead. Alt+LeftClick on the sequence selector Repeat the last command. KDE by default blocks this combination, use Tab instead. Ctrl+Z or Ctrl+U Undo (YASARA Model and above) Ctrl+R Redo (YASARA Model and above) °  Analyzing the soup Insert or I Show/hide the head up display (HUD) Ctrl+Insert or Ctrl+I Change the data displayed in the right HUD (YASARA Dynamics and above) LeftClick on atom Mark atom, display its properties in the HUD LeftClick on sequence selector Mark atom in clicked residue PageDown or MouseWheelDown Mark next atom, see MouseWheel command. PageUp or MouseWheelUp Mark previous atom, see MouseWheel command. Ctrl+LeftClick on atoms Display distance / angle / dihedral in the left HUD (one atom must be marked) Ctrl+LeftClick on sequence selector Zoom in on the clicked residue RightClick on marked atom Show atom context menu RightClick on sequence selector Show residue context menu Home Show details about the previous charge or bond in the simulation HUD (YASARA Dynamics and above) End Show details about the next charge or bond in the simulation HUD (YASARA Dynamics and above) Pointer on sequence selector + letters Find the amino acid sequence typed in one letter code while the mouse pointer is placed on top of the sequence selector °  Controlling a simulation These keys only work in YASARA Dynamics and above. F10 Change simulation temperature control Ctrl+F10 Change simulation temperature control, reversed direction F11 Pause/continue simulation Ctrl+F11 Continue a paused simulation for one single step F12 Switch simulation on/off 1..9 Set pulling force (not on numeric keypad) Ctrl+RightButton Pull the marked atom toward the mouse pointer (during simulations) Ctrl+LeftButton+RightButton Pull the object containing the marked atom toward the mouse pointer (during simulations) Ctrl+MiddleButton Pull the object containing the marked atom toward the mouse pointer (during simulations) In MacOSX, the function keys F10 to F12 are normally occupied by Expose. If you do not want to reconfigure its keybindings, you can alternatively use the three keys just below on a typical Apple keyboard: '0' instead of F10, and then the two keys to the right instead of F11 and F12 (the actual characters printed on these keys depend on your location). If you use a MacBook trackpad, you can pull the marked atom by holding down 'Command' and the trackpad button. °  Using the console The console size and font can be configured separately . Space Bring up the console Space If pressed a second time, extend the console to full size Return Leave the console LeftButton Select text and copy to clipboard MiddleButton Paste the clipboard Ctrl+V Paste the clipboard PageUp Scroll console one page down PageDown Scroll console one page up MouseWheelUp Scroll console half a page down MouseWheelDown Scroll console half a page up Ctrl+CursorUp Scroll console one line down Ctrl+CursorDown Scroll console one line up CursorUp Show previous command in the history CursorDown Show next command in the history or clear input line Home Move cursor to start of line End Move cursor to end of line Ins Toggle the HUD Ctrl+Ins Change the HUD Esc Interrupt a running macro that does not Wait °  Other keys Pause or P Pause/continue YASARA Ctrl+Pause or Ctrl+P Continue paused YASARA for one single step Ctrl+M Rerun the last macro or movie Ctrl+Esc Exit YASARA immediately