If you want to select items close to or far away from something
(e.g. a ligand), this is the operator of choice. It keeps everything in the first selection that has the right distance X from the items in the second selection.
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ColorAtom CA with distance < 10 from Mol C,yellow
| Color all CA atoms that are closer than 10 A to molecule C yellow |
ColorRes Asp Glu with distance < 5 from Arg Lys,blue
| Color all Asp or Glu residues blue, that have at least one atom closer than
5 A to an Arg or Lys residue |
ListRes all with distance > 8 from ATP
| List all residues that do not contain any atom closer than
8 A to an ATP residue |
DelRes HOH Atom O with distance > 6 from Protein
| Delete all water molecules whose oxygen atom is more than
6 A away from any protein |
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