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° | The 'with <>X bonds to' operator analyzes bound atoms |
This operator keeps those atoms in the first selection that make the specified number of bonds to atoms in the second selection.
Examples:
ShowAtom Element H with bond to Element !C | Show all polar hydrogens |
HideAtom Element H with 1 bond to Element C | Hide all non-polar hydrogens |
ColorAtom Element N with >2 bonds to Element H,red | Color N-terminal and Lysine nitrogens red |
DelAtom all with <4 bonds to all | Delete all atoms making less than four bonds |
Note that bonds to metal ions are normally
visualized as arrow cylinders, but not treated as real bonds and thus ignored by this operator.