| |
 | | |
| Command | | Argument | | Datatype | | Default |
| Min |
| Max | | |
| Format: |
| SwapHyd<Obj|All> |
| Object selection, | | SELECTION | |
- | | - | | - | | | | |
| | Order = mixed | separated | | STRING | | - | | - |
| - |
| | | Python: | | SwapHyd<Obj|All>(selection1,order) | | |
| Menu: | | Edit > Swap > Hydrogens |
| | | Related: | | AddHyd
, DelHyd, Clean
| | | |
| Required: | |  | |
|
The current PDB standard is to collect the hydrogens at the end of residues,
while it is often more convenient (and required by some NMR programs) to order them immediately after the heavy atom they belong to.
Example 1:
SwapHydObj 1crn,Order=mixed
Mix the hydrogens with the heavy atoms in object 1crn, making sure that hydrogens immediately follow their heavy atoms in the
soup.
Example
2:
SwapHydObj 1crn,Order=separated
Separate the hydrogens from the heavy atoms in object 1crn,
collecting them at the end of residues.
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