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° | Style | - | Set general display style |
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| | | Command | | Argument | | Datatype | | Default | | Min | | Max | |
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| Format: | | Style | Backbone = Ball | BallStick | Stick | Tube | Ribbon | Cartoon, | | STRING | | - | | - | | - |
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| | Sidechain = Ball | BallStick | Stick | Off | | STRING | | - | | - | | - | | |||
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| Python: | | Style(backbone,sidechain) | | ||||||||||
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| Menu: | | View > Scene style | | ||||||||||
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| Keys: | | <F1> - Show scene as space filling balls <F2> - Show scene as balls&sticks <F3> - Show scene as sticks <F4> - Show scene as CA-trace <F5> - Show scene as tube, hide side-chain atoms <F6> - Show scene as ribbon, hide side-chain atoms <F7> - Show scene as cartoon, hide side-chain atoms <F8> - Cycle through side-chain styles | | ||||||||||
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| Related: | | Ball, BallStick, Stick , ShowSecStr, HideSecStr , Color |
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| Required: | |
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The default style
for the backbone is the current style. The default style for the side-chains is the one chosen for the backbone except if Tube,
Ribbon or Cartoon are selected, then the default side-chain style is 'off'. The
Style command changes the entire scene at once and affects the style of newly loaded
'unstyled' molecules (from PDB files etc.).
Tubes, ribbons and cartoons
bridge gaps in the peptide chain provided that the conditions described here
are met.
Note that YASARA does not reassign secondary structure at every step of a simulation,
as this would slow things down considerably. Instead, press one of the function keys
<F5> to <F7> to track changes in secondary structure. Alternatively,
you can run a little macro:
Console Off while 1 Style Ribbon Wait 10
Example 1:
Style Ball
Show scene as space filling balls.
Example 2:
Style BallStick
Show scene as balls&sticks.
Example 3:
Style Stick
Show scene as sticks.
Example 4:
Style Trace
Show scene as CA-trace.
Example 5:
Style Tube
Show scene as tube, hide side-chain atoms.
Example 6:
Style Ribbon
Show scene as ribbon, hide side-chain atoms.
Example 7:
Style Cartoon
Show scene as cartoon, hide side-chain atoms.
Example 8:
Style Backbone=Ball,Sidechain=Stick
Show backbone as balls, side-chains as sticks.
Example 9:
Style Ribbon,Stick
Show backbone as ribbon, side-chains as sticks.
Example macro 1:
# EXAMPLE Style Tube Clear LoadPDB 1crn PosObj 1crn,Z=20 Style Tube
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| Figure: Result of the example macro 1 above. |
Example macro 2:
# EXAMPLE Style Ribbon Clear LoadPDB 1crn PosObj 1crn,Z=20 Style Ribbon
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| Figure: Result of the example macro 2 above. |
Example macro 3:
# EXAMPLE Style Cartoon Clear LoadPDB 1crn PosObj 1crn,Z=20 Style Cartoon
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| Figure: Result of the example macro 3 above. |