Endonuclease PvuII (1PVI) DNA - GATTACAGATTACA
CAP - Catabolite gene Activating Protein (1BER)
DNA - GATTACAGATTACAGATTACA Endonuclease PvuII bound to palindromic DNA recognition site CAGCTG (1PVI) DNA - GATTACAGATTACAGATTACA TBP - TATA box Binding Protein (1C9B)
CAP - Catabolite gene Activating Protein (1BER)
GCN4 - leucine zipper transcription factor bound to palindromic DNA recognition site ATGAC(G)TCAT (1YSA)
GCN4 - leucine zipper transcription factor bound to palindromic DNA recognition site ATGAC(G)TCAT (1YSA)
GCN4 - leucine zipper transcription factor bound to palindromic DNA recognition site ATGAC(G)TCAT (1YSA)
GCN4 - leucine zipper transcription factor bound to palindromic DNA recognition site ATGAC(G)TCAT (1YSA)
GCN4 - leucine zipper transcription factor bound to palindromic DNA recognition site ATGAC(G)TCAT (1YSA)
TBP - TATA box Binding Protein (1C9B)
 

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Restraints

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Enforce distances and dihedral angles

In addition to simply linking atoms with a spring , you can determine NMR structures using the same functions as XPLOR to restrain distances and dihedral angles individually or all together via a restraint file . The violation energies and statistics can be obtained using various potential functions and parameters like distance averaging . The restraints can be listed , selectively shown (satisfied restraints in green, violated ones in red), styled, hidden or deleted. Floating assignments can also be analyzed.

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AddSpring

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Link atoms with a spring

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DelRest<Obj|All>

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Delete restraints

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HideRest<Atom|Res|Mol|Obj|All>

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Hide restraints

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LoadTbl

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Load XPLOR distance and dihedral angle restraints

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ListFloat<Obj|All>

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List floating assignments

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ListRest<Atom|Res|Mol|Obj|All>

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List restraints and energies

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RestEnergy<Obj|All>

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Calculate restraint energies

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RestViol<Obj|All>

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Get restraint violation statistics

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RestrainDis

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Restrain distance

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RestrainDih

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Restrain dihedral angle

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RestrainPar

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Set/get restraining parameters

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RestrainPot

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Set/get restraining potential function

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SaveTbl

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Save XPLOR distance and dihedral angle restraints

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ScaleRest<Atom|Res|Mol|Obj|All>

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Scale restraints

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ShowRest<Atom|Res|Mol|Obj|All>

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Show restraints