°
File
-
Load and save the scene or parts of it
°
New scene - Start again
Clear all objects and bitmaps for a fresh start
or
reset YASARA entirely
, including simulation parameters and undo-history.
°
Clear
-
Clear scene
°
Reset
-
Reset YASARA to startup state
°
PDB files - Load and save objects in plain PDB format
Load PDB files
and
save them again in standard PDB or X-Plor format
.
°
LoadPDB
-
Load Protein Data Bank file
°
SavePDB
-
Save Protein Data Bank file
°
YASARA objects - Load and save complete objects
Load single objects in YASARA's own format
, including styles and items and
save them to disk
.
°
LoadYOb
-
Load YASARA object
°
SaveYOb
-
Save YASARA object
°
YASARA scenes - Load and save the entire scene
Load all objects together
and
save them including styles,items and the view
.
°
LoadSce
-
Load complete scene
°
SaveSce
-
Save complete scene
°
OpenBabel
-
Import and export molecules using OpenBabel
When working with more exotic file formats,
import
and
export
structures with OpenBabel.
°
Load*
-
Import file with OpenBabel
°
Save*
-
Export file with OpenBabel
°
Screenshots
-
Save plain or ray-traced screenshots
Save simple screenshots
(optionally including the menu),
save scene descriptions for PovRay
or
run it immediately
to create photorealistic images including shadows.
°
RayTrace
-
Create raytraced screenshot using POVRay
°
SaveBMP
-
Save screenshot as Windows bitmap
°
SavePOV
-
Save POVRay scene description
°
MPEG movies - Encode plain or ray-traced animations
Save MPEG movies
(optionally including the menu).
°
SaveMPG
-
Save MPEG video
°
Simulation snapshots - Load and save simulation states
Load simulation snapshots to restore atom positions and velocities at a certain time
or
save them in periodic time intervals
. Atom positions without velocities can also be
saved
and
restored
in XTC format, which minimizes the required storage space.
°
LoadSim
-
Load simulation snapshot in sim format
°
LoadXTC<Obj|All>
-
Load simulation snapshot in XTC format
°
SaveSim
-
Save simulation snapshots in sim format
°
SaveXTC
-
Save simulation snapshots in XTC format
°
Exit
-
Quit YASARA
Exit YASARA
immediately
.
°
Exit
-
Exit YASARA
