BuildLoopDB - Build loop data base

CAP - Catabolite gene Activating Protein (1BER)

DNA - GATTACAGATTACAGATTACA

Endonuclease PvuII bound to palindromic DNA recognition site CAGCTG (1PVI)

DNA - GATTACAGATTACAGATTACA

TBP - TATA box Binding Protein (1C9B)

GCN4 - leucine zipper transcription factor bound to palindromic DNA recognition site ATGAC(G)TCAT (1YSA)

GCN4 - leucine zipper transcription factor bound to palindromic DNA recognition site ATGAC(G)TCAT (1YSA)

GCN4 - leucine zipper transcription factor bound to palindromic DNA recognition site ATGAC(G)TCAT (1YSA)

GCN4 - leucine zipper transcription factor bound to palindromic DNA recognition site ATGAC(G)TCAT (1YSA)

TBP - TATA box Binding Protein (1C9B)

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BuildLoopDB

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Build loop data base

Command

Argument

Datatype

Default

Min

Max

Format:

BuildLoopDB

Filename = PDB ID Listname

STRING

-

-

-

Python:

BuildLoopDB(filename)

Menu:

Edit > Build > Loop database

Related:

BuildLoop, SampleLoop

Required:

Example:

BuildLoopDB pdb-30

Build loop database from the PDB ID codes and chains listed in file pdb-30.dat or dat/pdb-30.dat.